Genomic Analysis of Green Plant SNAREs

Arabidopsis SNAREs: Compiled as in Pratelli et al., 2004; Uemura et al., 2004; Sanderfoot et al., 2000. Also see: Sanderfoot, 2007.
Qa-SNAREs (Syntaxins)

Qa-SYP1: PM
•Qa-SYP13 PM
At3g03800 SYP131 T | N | S
At5g08080 SYP132 T | N | S
•Qa-SYP12
•• PEN1/ROR2 sub.: PM
At3g11820 PEN1/SYR1(SYP121) T | N | S
At3g52400 SYP122 T | N | S
•• SYP124-like sub.: PM
At4g03330 SYP123 ψ T | N | S
At1g61290 SYP124 T | N | S
At1g11250 SYP125 T | N | S
•Qa-SYP11 CP
At1g08560 KNOLLE (SYP111) T | N | S
At2g18260 SYP112 T | N | S
Qa-SYP2: LE/Vac.
At5g16830 SYP21 (AtPEP12) T | N | S
At5g46860 SGR3/SYP22 (AtVAM3) T | N | S
At4g17730 SYP23 (AtPLP) T | N | S
At1g32270 SYP24 ψ T | N | S
Qa-SYP3: cis-Golgi
At5g05760 SYP31 (AtSED5) T | N | S
At3g24350 SYP32 T | N | S
Qa-SYP4: TGN
At5g26980 SYP41 (AtTLG2a) T | N | S
At4g02195 SYP42 (AtTLG2b) T | N | S
At3g05710 SYP43 T | N | S
Qa-SYP8: ER
At1g51740 SYP81 T | N | S

Qb-SNAREs

Qb-SEC20: ER
At3g24315 SEC20 T | N | S
Qb-MEMBRIN: ER/Golgi
At2g36900 MEMB11 T | N | S
At5g50440 MEMB12 T | N | S
Qb-GOS1: Golgi
At1g15880 GOS11 T | N | S
At2g45200 GOS12 T | N | S
Qb-VTI1: Golgi/EE
At5g39510 ZIG/VTI11 (AtVTI1a) T | N | S
At1g26670 ZIP/VTI12 (AtVTI1b) T | N | S
At3g29100 VTI13 ψ T | N | S
At5g39630 VTI14 ψ T | N | S
Qb-NPSN1: Golgi/EE/PM
At2g35190 NPSN11 T | N |S
At1g48240 NPSN12 T | N | S
At3g17440 NPSN13 T | N | S

Qb+c-SNAREs

Qb+c-SNAP33: Plasma Membrane
At5g61210 SNAP33 T | N | S
At1g13890 SNAP30 T | N | S
At5g07880 SNAP29 T | N | S

Links:
TTAIR
NNCBI
SSIGNAL
Qc-SNAREs

Qc-USE1: ER
At1g54110 USE11 (≠"CAX10") T | N | S
At3g55600 USE12 T | N | S
Qc-BET1: ER-Golgi
At3g58170 BET11 (AtBS14a) T | N | S
At4g14455 BET12 (AtBS14b) T | N | S
Qc-SFT1: Golgi(?)
At4g14600 SFT11 T | N | S
At1g29060 SFT12 T | N | S
Qc-SYP6: TGN/EE
At1g28490 OSM1/SYP61 T | N | S
Qc-SYP5: TGN/LE/Vac.
At1g16240 SYP51 T | N | S
At1g79590 SYP52 T | N | S
Qc-SYP7: TGN/EE/PM
At3g09740 SYP71 T | N | S
At3g45280 SYP72 T | N | S
At3g61450 SYP73 T | N | S

Legend:
EREndoplasmic reticulum
TGNtrans-Golgi network
EEEarly Endosome
LELate Endosome
PMPlasma Membrane
CPCell Plate
VacVacuole
ψPseudogene (probably)
R-SNAREs

R-SEC22: ER-Golgi
At1g11890 SEC221 T | N | S
At5g52270 SEC222 T | N | S
R-YKT6: Golgi-LE
At5g58060 YKT61 T | N | S
At5g58180 YKT62 T | N | S
R-VAMP7:
• R-VAMP71
•• VAMP711 sub.: LE/Vac.
At4g32150 VAMP711 (AtVAMP7c) T | N | S
At2g25340 VAMP712 T | N | S
At5g11150 VAMP713 T | N | S
•• VAMP714 sub.: Golgi(?)
At5g22360 VAMP714 T | N | S
• R-VAMP72
•• VAMP721 sub.: EE/PM
At1g04750 VAMP721 (At VAMP7B) T | N | S
At2g33120 VAMP722 T | N | S
At2g33110 VAMP723 ψ T | N | S
At2g32670 VAMP725 T | N | S
At1g04760 VAMP726 T | N | S
At3g24890 VAMP728 ψ T | N | S
•• VAMP724 sub.: EE/PM
At4g15780 VAMP724 T | N | S
•• VAMP727 sub.: EE
At3g54300 VAMP727 T | N | S
R-Tomosyn: PM(?)
At5g05570 TYN11 T | N | S
At4g35560 TYN12 T | N | S
Graphical Representation of SNARE genes in several organisms, see Sanderfoot, 2007.


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