Department of Biomedical Engineering

University of Minnesota


 
 
COURSES

BMEn 2501/5501 "Cellular and Molecular Biology for Biomedical Engineers" (4 cr/3 cr)

This course introduces cellular and molecular biology to an engineering audience and from and engineering perspective. Emphasis is on the physical and chemical basis of cellular process, including the importance of diffusion, thermodynamics, chemical kinetics, and mechanical forces. The undergraduate version has an integrated laboratory, and the graduate version has additional papers that are required.

Syllabus

BMEn 5351 "Cell Engineering" (3 cr)

This course introduces students to the modeling and analysis of cellular processes from a molecular perspective. Primary literature is reviewed, and students learn how to model cellular processes using differential equations and Monte Carlo simulations. I have established a "Cell Modeling Collaborative" where experimentalists who are interested in developing mathematical and computational models for cellular processes advise students on a modeling project. Please contact me if you are interested in participating (oddex002@umn.edu).

Syllabus

Reading List

Homework 1

Lecture Jan 16, 2007

Supplementary notes on enzyme kinetics

Homework 2

mc_rxn.m

rand_walk.m

hw3_1.m

hw3_1_init.m

Homework 3

Lectures on cell signaling

project description

possible projects

Homework 4

Homework 4 Supplement

BVP code

Poster example

 
 

 
           

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